STRINGSTRING
RB2654_20598 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_20598" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_20598Uncharacterized protein (112 aa)    
Predicted Functional Partners:
pyrD
Dihydroorotate oxidase ; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor (354 aa)
              0.897
RB2654_20588
Arsenate reductase (115 aa)
              0.880
RB2654_20603
Ser/Thr protein phosphatase/nucleotidase, putative (522 aa)
              0.588
RB2654_16161
Uncharacterized protein (109 aa)
   
          0.506
RB2654_17881
Hydrolase, NUDIX family protein (152 aa)
   
          0.478
RB2654_04491
Disulfide bond formation protein, DsbB family protein (155 aa)
   
          0.442
RB2654_20493
Uncharacterized protein (155 aa)
   
          0.433
RB2654_10933
Phosphoglycerate mutase family protein (182 aa)
 
          0.409
RB2654_18136
Uncharacterized protein (100 aa)
   
          0.405
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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