STRINGSTRING
RB2654_20848 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_20848" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_20848Uncharacterized protein (339 aa)    
Predicted Functional Partners:
RB2654_19613
Uncharacterized protein (106 aa)
   
          0.777
RB2654_05672
Uncharacterized protein (206 aa)
   
          0.776
RB2654_08577
Uncharacterized protein (293 aa)
   
          0.775
RB2654_00950
Uncharacterized protein (141 aa)
   
          0.771
RB2654_16831
Acetyltransferase, GNAT family protein (231 aa)
   
          0.770
RB2654_04129
Uncharacterized protein (195 aa)
   
          0.770
RB2654_08957
Rhomboid family protein (230 aa)
   
          0.766
RB2654_02209
Uncharacterized protein (212 aa)
   
          0.766
ftsQ
Cell division protein FtsQ ; Essential cell division protein (299 aa)
   
          0.766
RB2654_09009
ATPase (509 aa)
   
          0.764
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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