STRINGSTRING
RB2654_20938 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_20938" - ABC transporter, permease protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_20938ABC transporter, permease protein (424 aa)    
Predicted Functional Partners:
RB2654_20928
ABC transporter (ATP-binding protein) (507 aa)
 
   
  0.983
RB2654_20923
Surface lipoprotein (342 aa)
 
   
  0.954
RB2654_20933
Uncharacterized ABC-type transport system, permease component (383 aa)
 
   
0.948
RB2654_18843
Sugar ABC transporter, permease protein (365 aa)
 
   
  0.908
RB2654_18848
Sugar ABC transporter, ATP-binding protein (510 aa)
 
   
  0.887
RB2654_18828
Bmp family protein (361 aa)
 
   
  0.847
RB2654_07219
Ribose ABC transporter, ATP-binding protein (544 aa)
 
          0.685
RB2654_09454
Ribose import ATP-binding protein RbsA ; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system (515 aa)
 
          0.637
RB2654_20823
Cytidine deaminase (138 aa)
 
     
  0.635
RB2654_07306
Ribose import ATP-binding protein RbsA ; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system (502 aa)
 
          0.634
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (5%) [HD]