STRINGSTRING
RB2654_21143 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_21143" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_21143Uncharacterized protein (148 aa)    
Predicted Functional Partners:
RB2654_21133
Uncharacterized protein (398 aa)
 
          0.929
RB2654_21138
Uncharacterized protein (318 aa)
 
          0.916
RB2654_21148
Efflux ABC transporter, ATP-binding protein (243 aa)
 
          0.893
RB2654_21153
Transport permease protein (269 aa)
 
          0.882
RB2654_21158
Uncharacterized protein (190 aa)
 
          0.867
RB2654_21123
Amino acid ABC transporter, periplasmic substrate-binding protein, putative (297 aa)
 
          0.857
RB2654_21128
Cytochrome c550, putative (228 aa)
 
          0.836
RB2654_17811
Sensor histidine kinase/response regulator (731 aa)
 
          0.760
RB2654_17806
GfdT protein (391 aa)
 
          0.707
RB2654_21113
Regulatory protein, putative (695 aa)
   
          0.688
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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