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RB2654_21293 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_21293" - C4-dicarboxylate-binding periplasmic protein in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_21293C4-dicarboxylate-binding periplasmic protein (328 aa)    
Predicted Functional Partners:
RB2654_06739
TRAP dicarboxylate transporter, DctM subunit (425 aa)
 
  0.909
RB2654_19528
Putative permease protein (431 aa)
 
  0.908
RB2654_12439
TRAP transporter, DctM subunit (465 aa)
 
  0.907
RB2654_23258
TRAP transporter, DctM subunit (434 aa)
 
  0.898
RB2654_07581
Uncharacterized protein (430 aa)
 
  0.894
RB2654_13214
Putative membrane protein (434 aa)
 
  0.892
RB2654_23623
TRAP-T family transporter, DctM (12 TMs) subunit (434 aa)
 
  0.892
RB2654_13159
TRAP-T family transporter, DctM (12 TMs) subunit (432 aa)
 
  0.892
RB2654_19478
TrapT family, dctM subunit, C4-dicarboxylate transport (647 aa)
 
  0.890
RB2654_23343
Uncharacterized protein (437 aa)
 
  0.890
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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