STRINGSTRING
RB2654_21673 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_21673" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_21673Uncharacterized protein (476 aa)    
Predicted Functional Partners:
RB2654_21678
Transcriptional regulator, putative pyruvate dehydrogenase complex repressor (264 aa)
              0.658
RB2654_23263
Putative membrane protein (173 aa)
   
          0.619
RB2654_01565
Periplasmic ATP/GTP-binding protein (267 aa)
   
          0.555
RB2654_23268
Putative extracellular solute-binding protein (328 aa)
   
          0.550
RB2654_21683
FadE25_4 (385 aa)
              0.520
RB2654_21693
Uncharacterized protein (335 aa)
              0.517
RB2654_21688
Uncharacterized protein (378 aa)
              0.517
RB2654_16646
Uncharacterized protein (93 aa)
   
          0.504
RB2654_05647
TonB domain protein, putative (360 aa)
   
          0.464
RB2654_09209
Uncharacterized protein (403 aa)
   
          0.446
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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