STRINGSTRING
RB2654_21918 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_21918" - Replication initiator RepC in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_21918Replication initiator RepC (137 aa)    
Predicted Functional Partners:
RB2654_22658
RepA partitioning protein/ATPase, ParA type (280 aa)
   
          0.778
RB2654_22653
Rep B partitioning protein/ParB-like protein (266 aa)
   
          0.775
RB2654_22778
ATPase, ParA type (399 aa)
   
          0.772
RB2654_22783
ParB-like partition protein (327 aa)
   
          0.769
RB2654_21913
Uncharacterized protein (373 aa)
              0.659
RB2654_22023
Replication protein (431 aa)
   
          0.641
RB2654_12394
Uncharacterized protein (356 aa)
   
          0.553
RB2654_21923
Beta-lactamase-like (340 aa)
              0.507
RB2654_22018
Replication protein, putative (373 aa)
   
          0.500
RB2654_21908
Transcriptional regulator, LysR family protein (350 aa)
              0.486
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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