STRINGSTRING
RB2654_22013 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_22013" - Yld in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_22013Yld (365 aa)    
Predicted Functional Partners:
RB2654_22003
Uncharacterized protein (198 aa)
 
          0.845
RB2654_00500
Vir-like protein (337 aa)
   
          0.744
RB2654_00605
Uncharacterized protein (197 aa)
 
          0.739
RB2654_00545
T-DNA border endonuclease (642 aa)
   
          0.724
RB2654_16376
Site-specific recombinase XerD-like (324 aa)
   
          0.710
RB2654_23198
Uncharacterized protein (197 aa)
 
          0.679
RB2654_00505
VirB8 type IV secretion protein (188 aa)
   
          0.625
RB2654_22008
Uncharacterized protein (277 aa)
              0.550
RB2654_00485
Uncharacterized protein (370 aa)
   
          0.529
RB2654_00540
Type IV secretion system coupling protein (640 aa)
   
          0.510
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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