STRINGSTRING
RB2654_22408 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_22408" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_22408Uncharacterized protein (180 aa)    
Predicted Functional Partners:
RB2654_22413
Cation efflux system protein (321 aa)
              0.867
RB2654_22418
Uncharacterized protein (103 aa)
              0.860
RB2654_22383
DsbA-like thioredoxin domain protein (219 aa)
 
          0.663
RB2654_22403
Putative RND efflux system protein (206 aa)
              0.618
RB2654_22388
Disulfide bond formation protein, DsbB family protein (140 aa)
 
          0.597
RB2654_22618
ParB-like nuclease (660 aa)
   
          0.504
RB2654_22328
Probable metal-transporting P-type ATPase (728 aa)
   
          0.498
RB2654_22378
Uncharacterized protein (156 aa)
 
          0.476
RB2654_22553
Uncharacterized protein (309 aa)
   
          0.467
RB2654_22398
Transcriptional regulator, MerR family protein (147 aa)
              0.464
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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