STRINGSTRING
RB2654_22888 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_22888" - Probably methylase/helicase in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_22888Probably methylase/helicase (1446 aa)    
Predicted Functional Partners:
RB2654_22893
Uncharacterized protein (343 aa)
 
          0.980
RB2654_22898
Uncharacterized protein (323 aa)
 
          0.899
RB2654_00660
Uncharacterized protein (348 aa)
 
          0.858
RB2654_00655
Uncharacterized protein (303 aa)
 
          0.827
RB2654_22793
Uncharacterized protein (720 aa)
 
          0.791
RB2654_22853
Uncharacterized protein (139 aa)
 
          0.776
RB2654_22843
Uncharacterized protein (125 aa)
 
          0.746
RB2654_22553
Uncharacterized protein (309 aa)
   
          0.746
RB2654_00685
Uncharacterized protein (158 aa)
 
          0.699
RB2654_22583
Uncharacterized protein (159 aa)
 
          0.673
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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