STRINGSTRING
RB2654_23028 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_23028" - YjbJ in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_23028YjbJ (388 aa)    
Predicted Functional Partners:
RB2654_23038
Type IV secretion system protein B4, putative (794 aa)
 
   
  0.977
RB2654_23023
Uncharacterized protein (265 aa)
              0.881
RB2654_23013
Type IV secretion system protein B9, putative (197 aa)
 
     
  0.868
RB2654_23033
Uncharacterized protein (71 aa)
              0.863
RB2654_23008
Conjugal transfer protein (441 aa)
 
          0.860
RB2654_22993
Legionella vir homologue protein (341 aa)
 
          0.859
RB2654_23018
VirB8 type IV secretion protein (215 aa)
              0.832
RB2654_22458
Type IV secretion system protein B4, putative (776 aa)
 
   
  0.824
RB2654_22453
Type IV secretory pathway, VirB3-like protein (92 aa)
 
          0.780
RB2654_23003
Type IV secretion system protein B11, putative (344 aa)
 
          0.731
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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