STRINGSTRING
RB2654_23178 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_23178" - Plasmid replication initiation protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_23178Plasmid replication initiation protein (353 aa)    
Predicted Functional Partners:
RB2654_23188
ParB-like nuclease (359 aa)
   
          0.778
RB2654_23183
ParA family ATPase (465 aa)
   
          0.778
RB2654_15811
Indolepyruvate ferredoxin oxidoreductase (128 aa)
   
          0.686
RB2654_22978
Uncharacterized protein (279 aa)
   
          0.590
RB2654_22863
Uncharacterized protein (133 aa)
   
          0.557
RB2654_22973
Uncharacterized protein (543 aa)
   
          0.525
RB2654_22868
Uncharacterized protein (233 aa)
   
          0.518
RB2654_09914
Putative membrane protein (143 aa)
   
          0.512
RB2654_11413
Acetyltransferase, GNAT family protein (149 aa)
   
          0.487
RB2654_05480
Uncharacterized protein (74 aa)
   
          0.483
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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