STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ31287.1COG1012 NAD-dependent aldehyde dehydrogenases. (480 aa)    
Predicted Functional Partners:
EAQ30917.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
  
 
 0.966
EAQ32505.1
PTS system, glucose-specific IIA component; COG2190 Phosphotransferase system IIA components.
   
 
 0.964
EAQ31288.1
COG1012 NAD-dependent aldehyde dehydrogenases.
 
  
 
0.940
sdhA
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
   
 0.925
EAQ32704.1
COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.
  
 
 0.921
sdhC
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
   
 
  0.908
sdhD
COG2142 Succinate dehydrogenase, hydrophobic anchor subunit.
   
 
  0.907
EAQ30865.1
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.775
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.767
EAQ31575.1
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
 
 0.759
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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