STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR21573.1COG3784 Uncharacterized protein conserved in bacteria. (63 aa)    
Predicted Functional Partners:
EAR21571.1
Transcriptional Regulator, PadR-like family protein; COG1695 Predicted transcriptional regulators.
       0.515
EAR21572.1
Probable transporter; COG2059 Chromate transport protein ChrA.
       0.515
EAR21574.1
DEAD/DEAH box helicase-like protein; COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
       0.489
EAR21575.1
COG0286 Type I restriction-modification system methyltransferase subunit.
       0.449
EAR21576.1
COG0732 Restriction endonuclease S subunits.
       0.449
EAR21577.1
Hypothetical protein.
       0.449
Your Current Organism:
Nitrococcus mobilis
NCBI taxonomy Id: 314278
Other names: N. mobilis Nb-231, Nitrococcus mobilis Nb-231, Nitrococcus mobilis str. Nb-231, Nitrococcus mobilis strain Nb-231
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