STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR07876.1Hypothetical protein. (257 aa)    
Predicted Functional Partners:
EAR07877.1
Putative iron-siderophore binding lipoprotein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
    0.750
EAR07875.1
Iron (III) dicitrate transport system (iron (III)-binding protein); COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
    0.662
EAR07873.1
COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.643
EAR07874.1
Iron (III) dicitrate transport system (permease); COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.643
EAR10520.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
  
 0.607
EAR07945.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
  
 0.607
EAR10808.1
Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
  
 0.607
EAR08237.1
TolA family protein.
  
  
 0.607
EAR11353.1
TonB protein; COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
  
 0.607
EAR07880.1
Enterobactin-iron transport system ATP-binding protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
  
    0.588
Your Current Organism:
Reinekea blandensis
NCBI taxonomy Id: 314283
Other names: R. blandensis MED297, Reinekea blandensis MED297, Reinekea blandensis str. MED297, Reinekea blandensis strain MED297, Reinekea sp. MED297
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.