STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ97552.1Drug resistance transporter, Bcr/CflA subfamily. (432 aa)    
Predicted Functional Partners:
EAQ97553.1
Putative flavoprotein.
       0.781
EAQ95955.1
Homoserine dehydrogenase.
   
  0.595
EAQ99100.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.578
EAQ97551.1
Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family.
       0.556
EAQ96787.2
Chorismate mutase domain protein of proteobacterial P-protein, clade 2; Chorismate mutase.
  
 
 0.469
EAQ96014.2
Arabinose efflux permease.
  
     0.458
EAQ97449.1
Phosphoserine phosphatase SerB.
     
  0.400
Your Current Organism:
Congregibacter litoralis
NCBI taxonomy Id: 314285
Other names: C. litoralis KT71, Congregibacter litoralis KT71, Congregibacter litoralis str. KT71, Congregibacter litoralis strain KT71, gamma proteobacterium KT71, unknown marine gamma proteobacterium NOR5
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