STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNPutative methionine ABC transporter, ATP-binding subunit; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (344 aa)    
Predicted Functional Partners:
LCA_1114
Putative methionine ABC transporter, substrate binding lipoprotein precursor; Belongs to the nlpA lipoprotein family.
 0.999
LCA_1115
Putative methionine ABC transporter, membrane-spanning subunit.
 0.999
oppC
Oligopeptide ABC transporter, membrane-spanning subunit.
 
  
 0.904
LCA_0858
Putative amino acid ABC transporter, membrane-spanning subunit.
 
    
 0.795
LCA_1117
Putative aminomethyltransferase, family of glycine cleavage H protein.
     
 0.729
lmrA
Multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits.
 
     
0.693
LCA_0629
Putative drug ABC exporter, ATP-binding subunit.
 
    
0.681
LCA_1118
Rod-shape determining protein; Belongs to the SEDS family.
       0.663
LCA_1149
Putative multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunit.
 
     
0.634
LCA_1113
Putative ABC-type ATP-binding protein involved in Fe-S cluster assembly (SufC homolog).
       0.547
Your Current Organism:
Lactobacillus sakei
NCBI taxonomy Id: 314315
Other names: L. sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei 23K, Lactobacillus sakei subsp. sakei str. 23K, Lactobacillus sakei subsp. sakei strain 23K
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.