STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS20878.1TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; KEGG: bce:BC0611 aspartate ammonia-lyase. (477 aa)    
Predicted Functional Partners:
ABS21540.1
PFAM: Asparaginase/glutaminase; KEGG: btl:BALH_1351 L-asparaginase.
  
 
 0.965
ABS23368.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
   
 0.936
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
  
 
 0.922
ABS20632.1
TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: bcz:BCZK0265 adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
0.907
ABS21590.1
PFAM: aminotransferase class I and II; KEGG: btl:BALH_1397 aspartate aminotransferase.
    
 0.907
ABS22474.1
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: btk:BT9727_3308 argininosuccinate lyase; Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
     
0.907
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: bat:BAS4527 argininosuccinate lyase.
     
0.907
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.907
ABS22165.1
TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: bca:BCE_2665 aspartate racemase family protein; Belongs to the aspartate/glutamate racemases family.
    
  0.906
ABS23638.1
TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: bca:BCE_4895 aspartate racemase family protein; Belongs to the aspartate/glutamate racemases family.
    
  0.906
Your Current Organism:
Bacillus cytotoxicus
NCBI taxonomy Id: 315749
Other names: B. cytotoxicus NVH 391-98, Bacillus cereus NVH 391-98, Bacillus cereus subsp. cytotoxicus NVH 391-98, Bacillus cereus subsp. cytotoxis NVH 391-98, Bacillus cytotoxicus NVH 391-98, Bacillus cytotoxicus str. NVH 391-98, Bacillus cytotoxicus strain NVH 391-98, Bacillus cytotoxis NVH 391-98
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