STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS21750.1PFAM: S-layer domain protein; Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: btl:BALH_1595 N-acetylmuramoyl-L-alanine amidase, family 4. (458 aa)    
Predicted Functional Partners:
ABS21058.1
PFAM: polysaccharide pyruvyl transferase; KEGG: bcz:BCZK0788 pyruvyl-transferase.
 
    0.787
ABS21665.1
CheC, inhibitor of MCP methylation; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: bca:BCE_1750 flagellar motor switch protein, putative.
  
    0.577
ABS23964.1
PFAM: 3D domain protein; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: btl:BALH_4738 hypothetical protein.
  
  
 0.539
ABS24118.1
Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
 
     0.528
ABS23938.1
PFAM: glycosyl transferase family 4; KEGG: bce:BC5203 undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase.
 
     0.512
ABS21919.1
PFAM: cell wall hydrolase/autolysin; KEGG: bca:BCE_2849 N-acetylmuramoyl-L-alanine amidase.
  
  
 0.492
ABS20923.1
PFAM: 3D domain protein; KEGG: bcz:BCZK0596 hypothetical protein.
  
    0.465
ABS21060.1
PFAM: S-layer domain protein; KEGG: bat:BAS0842 S-layer protein EA1.
 
  
0.453
ABS23738.1
PFAM: 3D domain protein; KEGG: bce:BC4922 hypothetical membrane associated protein.
   
    0.433
ABS21814.1
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bca:BCE_2056 transcription antiterminator, LytR family.
 
     0.432
Your Current Organism:
Bacillus cytotoxicus
NCBI taxonomy Id: 315749
Other names: B. cytotoxicus NVH 391-98, Bacillus cereus NVH 391-98, Bacillus cereus subsp. cytotoxicus NVH 391-98, Bacillus cereus subsp. cytotoxis NVH 391-98, Bacillus cytotoxicus NVH 391-98, Bacillus cytotoxicus str. NVH 391-98, Bacillus cytotoxicus strain NVH 391-98, Bacillus cytotoxis NVH 391-98
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