STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS22027.1TIGRFAM: 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family protein; KEGG: btl:BALH_2094 2-methylisocitrate dehydratase. (478 aa)    
Predicted Functional Partners:
ABS22028.1
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.
 
  
 0.987
ABS22026.1
PFAM: Citrate synthase; KEGG: bce:BC2285 citrate synthase; Belongs to the citrate synthase family.
 
 0.974
ABS23497.1
TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; KEGG: btl:BALH_4178 citrate synthase; Belongs to the citrate synthase family.
  
 0.857
sat
TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; KEGG: bce:BC1422 sulfate adenylyltransferase; Belongs to the sulfate adenylyltransferase family.
 
    0.769
ABS22106.1
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: bce:BC2488 propionyl-CoA carboxylase beta chain.
  
    0.601
ABS22030.1
3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bca:BCE_2381 2-hydroxy-3-oxopropionate reductase.
 
    0.536
ABS22029.1
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bce:BC2288 acyl-CoA dehydrogenase.
  
  
 0.504
ABS20765.1
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.481
ABS22167.1
PFAM: protein of unknown function DUF453; KEGG: pol:Bpro_4551 protein of unknown function DUF453.
 
    0.476
ABS22513.1
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
 
  
 0.462
Your Current Organism:
Bacillus cytotoxicus
NCBI taxonomy Id: 315749
Other names: B. cytotoxicus NVH 391-98, Bacillus cereus NVH 391-98, Bacillus cereus subsp. cytotoxicus NVH 391-98, Bacillus cereus subsp. cytotoxis NVH 391-98, Bacillus cytotoxicus NVH 391-98, Bacillus cytotoxicus str. NVH 391-98, Bacillus cytotoxicus strain NVH 391-98, Bacillus cytotoxis NVH 391-98
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