STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS22627.1PFAM: Collagen triple helix repeat; KEGG: btk:BT9727_3456 conserved hypothetical protein, possible collagen-like triple helix repeat protein. (842 aa)    
Predicted Functional Partners:
ABS21613.1
KEGG: swo:Swol_1310 hypothetical protein.
  
    0.631
ABS21265.1
PFAM: glycosyl transferase family 2; KEGG: bcz:BCZK1105 glycosyltransferase.
 
  
 0.559
ABS22626.1
PFAM: phage integrase domain protein SAM domain protein; KEGG: btk:BT9727_3455 possible phage integrase family protein; Belongs to the 'phage' integrase family.
  
    0.530
ABS23834.1
Hypothetical protein; KEGG: ehi:82.t00025 viral A-type inclusion protein repeat, putative Pfam: Nha1_C Rho_Binding ERM Prefoldin_2 WXG100 Vicilin_N TBPIP Myosin_tail_1 Filament YscO Bacillus_HBL HAP1_N EzrA DUF948 Rab5-bind Laminin_I MpPF2 MSG Spectrin LMP PROSITE: GLU_RICH LYS_RICH.
  
     0.503
ABS23835.1
Chromosome segregation ATPase-like protein; KEGG: ehi:82.t00025 viral A-type inclusion protein repeat, putative Pfam: Nha1_C Rho_Binding ERM Prefoldin_2 WXG100 Vicilin_N TBPIP Myosin_tail_1 Filament YscO Bacillus_HBL HAP1_N EzrA DUF948 Rab5-bind Laminin_I MpPF2 MSG Spectrin LMP PROSITE: GLU_RICH LYS_RICH.
 
 
 0.490
ABS21124.1
TIGRFAM: LPXTG-motif cell wall anchor domain; KEGG: bce:BC3221 surface protein.
 
 
 0.424
ABS21342.1
PFAM: SCP-like extracellular; KEGG: bat:BAS1208 hypothetical protein.
  
    0.403
ABS22822.1
TIGRFAM: phage major tail protein, phi13 family; KEGG: cth:Cthe_1713 phage major tail protein, phi13 family.
  
    0.403
ABS22874.1
PFAM: SCP-like extracellular; KEGG: btl:BALH_3566 hypothetical protein.
  
    0.403
Your Current Organism:
Bacillus cytotoxicus
NCBI taxonomy Id: 315749
Other names: B. cytotoxicus NVH 391-98, Bacillus cereus NVH 391-98, Bacillus cereus subsp. cytotoxicus NVH 391-98, Bacillus cereus subsp. cytotoxis NVH 391-98, Bacillus cytotoxicus NVH 391-98, Bacillus cytotoxicus str. NVH 391-98, Bacillus cytotoxicus strain NVH 391-98, Bacillus cytotoxis NVH 391-98
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