Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABS21554.1 | ABS22786.1 | Bcer98_1232 | Bcer98_2552 | Sporulation stage IV protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.811 |
| ABS21554.1 | ABS22788.1 | Bcer98_1232 | Bcer98_2554 | Sporulation stage IV protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | 0.779 |
| ABS21554.1 | ABS22998.1 | Bcer98_1232 | Bcer98_2765 | Sporulation stage IV protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | TIGRFAM: Sporulation stage V protein AE; PFAM: SpoVA protein; KEGG: btl:BALH_3683 stage V sporulation protein AE, N-terminal region. | 0.774 |
| ABS21554.1 | ABS22999.1 | Bcer98_1232 | Bcer98_2766 | Sporulation stage IV protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | PFAM: Stage V sporulation AD family protein; KEGG: bcz:BCZK3824 stage V sporulation protein AD. | 0.779 |
| ABS21554.1 | ABS23000.1 | Bcer98_1232 | Bcer98_2767 | Sporulation stage IV protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | TIGRFAM: Sporulation stage V protein AC; PFAM: SpoVA protein; KEGG: bcz:BCZK3825 stage V sporulation protein AC. | 0.790 |
| ABS21554.1 | ABS23004.1 | Bcer98_1232 | Bcer98_2771 | Sporulation stage IV protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.765 |
| ABS21554.1 | ABS23006.1 | Bcer98_1232 | Bcer98_2773 | Sporulation stage IV protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; Anti-sigma F factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: btl:BALH_3692 anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.697 |
| ABS21554.1 | ABS23989.1 | Bcer98_1232 | Bcer98_3799 | Sporulation stage IV protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | TIGRFAM: Sporulation stage III transcriptional regulator SpoIIID; KEGG: btl:BALH_4786 stage III sporulation protein D. | 0.846 |
| ABS21554.1 | spoIIAB | Bcer98_1232 | Bcer98_2772 | Sporulation stage IV protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | Putative anti-sigma regulatory factor, serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.822 |
| ABS22786.1 | ABS21554.1 | Bcer98_2552 | Bcer98_1232 | RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sporulation stage IV protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.811 |
| ABS22786.1 | ABS22788.1 | Bcer98_2552 | Bcer98_2554 | RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | 0.852 |
| ABS22786.1 | ABS22998.1 | Bcer98_2552 | Bcer98_2765 | RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | TIGRFAM: Sporulation stage V protein AE; PFAM: SpoVA protein; KEGG: btl:BALH_3683 stage V sporulation protein AE, N-terminal region. | 0.771 |
| ABS22786.1 | ABS22999.1 | Bcer98_2552 | Bcer98_2766 | RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PFAM: Stage V sporulation AD family protein; KEGG: bcz:BCZK3824 stage V sporulation protein AD. | 0.778 |
| ABS22786.1 | ABS23000.1 | Bcer98_2552 | Bcer98_2767 | RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | TIGRFAM: Sporulation stage V protein AC; PFAM: SpoVA protein; KEGG: bcz:BCZK3825 stage V sporulation protein AC. | 0.772 |
| ABS22786.1 | ABS23006.1 | Bcer98_2552 | Bcer98_2773 | RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; Anti-sigma F factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: btl:BALH_3692 anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.559 |
| ABS22786.1 | ABS23989.1 | Bcer98_2552 | Bcer98_3799 | RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | TIGRFAM: Sporulation stage III transcriptional regulator SpoIIID; KEGG: btl:BALH_4786 stage III sporulation protein D. | 0.814 |
| ABS22786.1 | spoIIAB | Bcer98_2552 | Bcer98_2772 | RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative anti-sigma regulatory factor, serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.848 |
| ABS22788.1 | ABS21554.1 | Bcer98_2554 | Bcer98_1232 | Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Sporulation stage IV protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.779 |
| ABS22788.1 | ABS22786.1 | Bcer98_2554 | Bcer98_2552 | Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | RNA polymerase, sigma 28 subunit, FliA/WhiG family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.852 |
| ABS22788.1 | ABS22998.1 | Bcer98_2554 | Bcer98_2765 | Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | TIGRFAM: Sporulation stage V protein AE; PFAM: SpoVA protein; KEGG: btl:BALH_3683 stage V sporulation protein AE, N-terminal region. | 0.465 |
page 1 of 5