STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS23385.1PFAM: peptidase M23B; KEGG: btl:BALH_4030 stage IV sporulation protein FA. (247 aa)    
Predicted Functional Partners:
ABS23384.1
PFAM: peptidase M50; KEGG: btl:BALH_4029 stage IV sporulation protein FB.
  
  
 0.872
ABS23114.1
TIGRFAM: Sporulation stage III protein AF; KEGG: bat:BAS4092 stage III sporulation protein AF.
  
    0.703
ABS23399.1
TIGRFAM: Sporulation stage VI protein D; PFAM: Peptidoglycan-binding LysM; KEGG: btl:BALH_4053 stage VI sporulation protein D.
  
   
 0.692
ABS23354.1
KEGG: bce:BC4409 hypothetical protein.
  
    0.672
ABS23991.1
PFAM: peptidase M23B; KEGG: btl:BALH_4787 stage II sporulation protein Q.
  
   
 0.648
ABS23383.1
TIGRFAM: ribonuclease, Rne/Rng family; KEGG: bat:BAS4343 ribonuclease, Rne/Rng family.
       0.636
ABS23425.1
KEGG: bce:BC4495 germination protein GerM.
  
     0.619
ABS20397.1
PFAM: sigmaK-factor processing regulatory BofA; KEGG: btl:BALH_0023 sigma-K factor processing regulatory protein.
  
   
 0.613
ABS20429.1
TIGRFAM: Spore cortex biosynthesis protein YabQ; KEGG: btk:BT9727_0054 probable membrane protein.
  
     0.606
ABS22873.1
KEGG: bce:BC3936 hypothetical cytosolic protein.
  
     0.592
Your Current Organism:
Bacillus cytotoxicus
NCBI taxonomy Id: 315749
Other names: B. cytotoxicus NVH 391-98, Bacillus cereus NVH 391-98, Bacillus cereus subsp. cytotoxicus NVH 391-98, Bacillus cereus subsp. cytotoxis NVH 391-98, Bacillus cytotoxicus NVH 391-98, Bacillus cytotoxicus str. NVH 391-98, Bacillus cytotoxicus strain NVH 391-98, Bacillus cytotoxis NVH 391-98
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.