STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPUM_2873ferredoxin-NADP reductase; Catalyzes the oxidation of ferredoxin with NADP. (332 aa)    
Predicted Functional Partners:
BPUM_1814
Glutamate synthase.
    
 0.826
BPUM_2507
Thioredoxin; Belongs to the thioredoxin family.
 0.733
BPUM_1319
Thioredoxin.
  
 
 0.674
BPUM_0426
Thioredoxin.
  
 0.589
BPUM_2630
Thioredoxin.
  
 0.589
BPUM_2623
Hypothetical protein.
  
 0.586
BPUM_0788
Thioredoxin.
   
 0.495
BPUM_0869
Histidine kinase.
    
 0.495
BPUM_1320
Thiol-disulfide oxidoreductase.
   
 0.495
BPUM_2935
Thioredoxin.
   
 0.495
Your Current Organism:
Bacillus pumilus
NCBI taxonomy Id: 315750
Other names: B. pumilus SAFR-032, Bacillus pumilus SAFR-032, Bacillus pumilus str. SAFR-032, Bacillus pumilus strain SAFR-032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.