STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpCABC transporter related; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (361 aa)    
Predicted Functional Partners:
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.996
RPE_0438
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_0406 binding-protein-dependent transport systems inner membrane component.
 
 0.995
RPE_0440
PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_0404 extracellular solute-binding protein, family 1.
 
 0.979
RPE_0544
PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_0097 extracellular solute-binding protein, family 1.
 
 0.975
RPE_3685
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3645 binding-protein-dependent transport systems inner membrane component.
 
 
 0.966
RPE_3684
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3644 binding-protein-dependent transport systems inner membrane component.
 
 0.949
RPE_1381
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_4214 binding-protein-dependent transport systems inner membrane component.
 
 
 0.905
RPE_1382
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_1365 binding-protein-dependent transport systems inner membrane component.
 
 
 0.880
RPE_1384
PFAM: extracellular solute-binding protein, family 1; KEGG: rpd:RPD_4063 extracellular solute-binding protein, family 1.
  
 
 0.790
RPE_0435
PFAM: heat shock protein Hsp20; KEGG: rpc:RPC_0409 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
   
   0.567
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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