STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tamTrans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate. (256 aa)    
Predicted Functional Partners:
RPE_3067
TIGRFAM: Twin-arginine translocation pathway signal; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpa:RPA4459 putative flavocytochrome c sulfide dehydrogenase, flavoprotein subunit.
 
    0.727
RPE_3068
Sulfide dehydrogenase (flavoprotein); PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpd:RPD_4248 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
    0.691
RPE_3985
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpd:RPD_2380 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
    0.691
RPE_2045
PFAM: Uncharacterized protein UPF0114; KEGG: rpc:RPC_2137 uncharacterized protein UPF0114.
       0.587
RPE_2042
KEGG: nwi:Nwi_2484 hypothetical protein.
       0.550
RPE_2043
PFAM: protein of unknown function DUF497; KEGG: rpc:RPC_2135 protein of unknown function DUF497.
       0.545
RPE_2041
TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: rpc:RPC_2133 transcriptional regulator, AbrB family.
       0.484
RPE_2047
TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_2140 lytic murein transglycosylase.
  
  
 0.475
RPE_4427
Transcriptional regulator, MarR family with acetyltransferase activity; PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; KEGG: bja:bll2512 putative acetyltransferase.
     
 0.402
RPE_2046
KEGG: rpc:RPC_2138 hypothetical protein.
       0.400
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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