Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RPC_0344 | RPC_0681 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | Enoyl-CoA hydratase. | 0.960 |
RPC_0344 | RPC_0737 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase-like. | 0.945 |
RPC_0344 | RPC_1037 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase-like. | 0.945 |
RPC_0344 | RPC_1674 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | Enoyl-CoA hydratase. | 0.961 |
RPC_0344 | RPC_1998 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | MaoC-like dehydratase. | 0.943 |
RPC_0344 | RPC_2051 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | butyryl-CoA dehydrogenase. | 0.945 |
RPC_0344 | RPC_2197 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase-like. | 0.945 |
RPC_0344 | RPC_4263 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | isovaleryl-CoA dehydrogenase. | 0.945 |
RPC_0344 | RPC_4297 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase-like. | 0.945 |
RPC_0344 | RPC_4699 | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase-like. | 0.945 |
RPC_0681 | RPC_0344 | Enoyl-CoA hydratase. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.960 |
RPC_0681 | RPC_0737 | Enoyl-CoA hydratase. | acyl-CoA dehydrogenase-like. | 0.493 |
RPC_0681 | RPC_1037 | Enoyl-CoA hydratase. | acyl-CoA dehydrogenase-like. | 0.493 |
RPC_0681 | RPC_1674 | Enoyl-CoA hydratase. | Enoyl-CoA hydratase. | 0.908 |
RPC_0681 | RPC_1998 | Enoyl-CoA hydratase. | MaoC-like dehydratase. | 0.525 |
RPC_0681 | RPC_2051 | Enoyl-CoA hydratase. | butyryl-CoA dehydrogenase. | 0.493 |
RPC_0681 | RPC_2197 | Enoyl-CoA hydratase. | acyl-CoA dehydrogenase-like. | 0.493 |
RPC_0681 | RPC_4263 | Enoyl-CoA hydratase. | isovaleryl-CoA dehydrogenase. | 0.493 |
RPC_0681 | RPC_4297 | Enoyl-CoA hydratase. | acyl-CoA dehydrogenase-like. | 0.493 |
RPC_0681 | RPC_4699 | Enoyl-CoA hydratase. | acyl-CoA dehydrogenase-like. | 0.493 |
page 1 of 5