Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPC_3802 | RPC_3803 | RPC_3802 | RPC_3803 | CheW protein. | CheA signal transduction histidine kinases. | 0.999 |
RPC_3802 | RPC_4104 | RPC_3802 | RPC_4104 | CheW protein. | Methyl-accepting chemotaxis sensory transducer. | 0.963 |
RPC_3802 | RPC_4105 | RPC_3802 | RPC_4105 | CheW protein. | Methyl-accepting chemotaxis sensory transducer. | 0.963 |
RPC_3802 | RPC_4243 | RPC_3802 | RPC_4243 | CheW protein. | MCP methyltransferase, CheR-type. | 0.909 |
RPC_3802 | RPC_4246 | RPC_3802 | RPC_4246 | CheW protein. | CheW protein. | 0.900 |
RPC_3802 | RPC_4247 | RPC_3802 | RPC_4247 | CheW protein. | CheA signal transduction histidine kinases. | 0.998 |
RPC_3802 | RPC_4607 | RPC_3802 | RPC_4607 | CheW protein. | CheA signal transduction histidine kinases. | 0.996 |
RPC_3802 | RPC_4670 | RPC_3802 | RPC_4670 | CheW protein. | CheW protein. | 0.971 |
RPC_3802 | RPC_4676 | RPC_3802 | RPC_4676 | CheW protein. | CheA signal transduction histidine kinases. | 0.996 |
RPC_3802 | cheB1 | RPC_3802 | RPC_4244 | CheW protein. | Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.976 |
RPC_3803 | RPC_3802 | RPC_3803 | RPC_3802 | CheA signal transduction histidine kinases. | CheW protein. | 0.999 |
RPC_3803 | RPC_4104 | RPC_3803 | RPC_4104 | CheA signal transduction histidine kinases. | Methyl-accepting chemotaxis sensory transducer. | 0.987 |
RPC_3803 | RPC_4105 | RPC_3803 | RPC_4105 | CheA signal transduction histidine kinases. | Methyl-accepting chemotaxis sensory transducer. | 0.987 |
RPC_3803 | RPC_4243 | RPC_3803 | RPC_4243 | CheA signal transduction histidine kinases. | MCP methyltransferase, CheR-type. | 0.966 |
RPC_3803 | RPC_4246 | RPC_3803 | RPC_4246 | CheA signal transduction histidine kinases. | CheW protein. | 0.998 |
RPC_3803 | RPC_4247 | RPC_3803 | RPC_4247 | CheA signal transduction histidine kinases. | CheA signal transduction histidine kinases. | 0.927 |
RPC_3803 | RPC_4607 | RPC_3803 | RPC_4607 | CheA signal transduction histidine kinases. | CheA signal transduction histidine kinases. | 0.614 |
RPC_3803 | RPC_4670 | RPC_3803 | RPC_4670 | CheA signal transduction histidine kinases. | CheW protein. | 0.996 |
RPC_3803 | RPC_4676 | RPC_3803 | RPC_4676 | CheA signal transduction histidine kinases. | CheA signal transduction histidine kinases. | 0.587 |
RPC_3803 | cheB1 | RPC_3803 | RPC_4244 | CheA signal transduction histidine kinases. | Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
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