node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPC_0276 | RPC_2608 | RPC_0276 | RPC_2608 | Cell divisionFtsK/SpoIIIE. | ATP-dependent DNA helicase RecG. | 0.425 |
RPC_0276 | dnaA | RPC_0276 | RPC_0001 | Cell divisionFtsK/SpoIIIE. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.680 |
RPC_0276 | mfd | RPC_0276 | RPC_2610 | Cell divisionFtsK/SpoIIIE. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.613 |
RPC_0276 | ruvA | RPC_0276 | RPC_4805 | Cell divisionFtsK/SpoIIIE. | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.654 |
RPC_0276 | ruvB | RPC_0276 | RPC_4803 | Cell divisionFtsK/SpoIIIE. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.631 |
RPC_0276 | ruvC | RPC_0276 | RPC_4806 | Cell divisionFtsK/SpoIIIE. | Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.447 |
RPC_2244 | RPC_2608 | RPC_2244 | RPC_2608 | DNA processing protein DprA, putative. | ATP-dependent DNA helicase RecG. | 0.638 |
RPC_2244 | dnaA | RPC_2244 | RPC_0001 | DNA processing protein DprA, putative. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.493 |
RPC_2244 | mfd | RPC_2244 | RPC_2610 | DNA processing protein DprA, putative. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.476 |
RPC_2244 | ruvA | RPC_2244 | RPC_4805 | DNA processing protein DprA, putative. | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.656 |
RPC_2244 | ruvB | RPC_2244 | RPC_4803 | DNA processing protein DprA, putative. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.544 |
RPC_2244 | ruvC | RPC_2244 | RPC_4806 | DNA processing protein DprA, putative. | Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.489 |
RPC_2608 | RPC_0276 | RPC_2608 | RPC_0276 | ATP-dependent DNA helicase RecG. | Cell divisionFtsK/SpoIIIE. | 0.425 |
RPC_2608 | RPC_2244 | RPC_2608 | RPC_2244 | ATP-dependent DNA helicase RecG. | DNA processing protein DprA, putative. | 0.638 |
RPC_2608 | dnaA | RPC_2608 | RPC_0001 | ATP-dependent DNA helicase RecG. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.662 |
RPC_2608 | mfd | RPC_2608 | RPC_2610 | ATP-dependent DNA helicase RecG. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.781 |
RPC_2608 | pheT | RPC_2608 | RPC_0444 | ATP-dependent DNA helicase RecG. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.562 |
RPC_2608 | ruvA | RPC_2608 | RPC_4805 | ATP-dependent DNA helicase RecG. | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.647 |
RPC_2608 | ruvB | RPC_2608 | RPC_4803 | ATP-dependent DNA helicase RecG. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.605 |
RPC_2608 | ruvC | RPC_2608 | RPC_4806 | ATP-dependent DNA helicase RecG. | Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.423 |