STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPD_1566Putative branched-chain amino acid ABC transport system substrate-binding protein. (426 aa)    
Predicted Functional Partners:
RPD_1567
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.965
RPD_1568
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.942
RPD_1565
ABC transporter related.
 
  
 0.874
RPD_1569
AMP-dependent synthetase and ligase.
 
    0.858
RPD_1570
ABC transporter related.
 
  
 0.850
RPD_0777
ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.586
RPD_1891
ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.586
RPD_3558
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.516
RPD_1517
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.434
RPD_1778
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.434
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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