Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RPD_0040 | RPD_1870 | Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.582 |
RPD_0306 | RPD_0320 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.909 |
RPD_0306 | RPD_0805 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.672 |
RPD_0306 | RPD_1870 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.582 |
RPD_0306 | RPD_3105 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.625 |
RPD_0306 | RPD_3106 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acyl-CoA dehydrogenase-like. | 0.933 |
RPD_0306 | RPD_3115 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Conserved hypothetical protein. | 0.600 |
RPD_0320 | RPD_0306 | Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.909 |
RPD_0320 | RPD_0805 | Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.913 |
RPD_0320 | RPD_1870 | Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.582 |
RPD_0320 | RPD_3105 | Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.913 |
RPD_0320 | RPD_3115 | Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Conserved hypothetical protein. | 0.900 |
RPD_0805 | RPD_0306 | Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.672 |
RPD_0805 | RPD_0320 | Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.913 |
RPD_0805 | RPD_1870 | Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.582 |
RPD_0805 | RPD_3105 | Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.676 |
RPD_0805 | RPD_3106 | Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acyl-CoA dehydrogenase-like. | 0.933 |
RPD_0805 | RPD_3115 | Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Conserved hypothetical protein. | 0.600 |
RPD_1869 | RPD_1870 | Short-chain dehydrogenase/reductase SDR. | Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.654 |
RPD_1869 | RPD_1871 | Short-chain dehydrogenase/reductase SDR. | AMP-dependent synthetase and ligase. | 0.441 |
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