Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPB_0099 | RPB_0908 | RPB_0099 | RPB_0908 | Pterin-4-alpha-carbinolamine dehydratase. | Maleylacetoacetate isomerase. | 0.535 |
RPB_0099 | RPB_0909 | RPB_0099 | RPB_0909 | Pterin-4-alpha-carbinolamine dehydratase. | Fumarylacetoacetate hydrolase. | 0.655 |
RPB_0099 | RPB_1495 | RPB_0099 | RPB_1495 | Pterin-4-alpha-carbinolamine dehydratase. | Protein of unknown function DUF1446. | 0.618 |
RPB_0099 | hmgA | RPB_0099 | RPB_0907 | Pterin-4-alpha-carbinolamine dehydratase. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.717 |
RPB_0903 | RPB_0904 | RPB_0903 | RPB_0904 | 3-(3-hydroxy-phenyl)propionate hydroxylase. | Conserved hypothetical protein. | 0.897 |
RPB_0903 | RPB_0906 | RPB_0903 | RPB_0906 | 3-(3-hydroxy-phenyl)propionate hydroxylase. | Beta-lactamase-like. | 0.897 |
RPB_0903 | RPB_0908 | RPB_0903 | RPB_0908 | 3-(3-hydroxy-phenyl)propionate hydroxylase. | Maleylacetoacetate isomerase. | 0.691 |
RPB_0903 | RPB_0909 | RPB_0903 | RPB_0909 | 3-(3-hydroxy-phenyl)propionate hydroxylase. | Fumarylacetoacetate hydrolase. | 0.525 |
RPB_0903 | hmgA | RPB_0903 | RPB_0907 | 3-(3-hydroxy-phenyl)propionate hydroxylase. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.826 |
RPB_0904 | RPB_0903 | RPB_0904 | RPB_0903 | Conserved hypothetical protein. | 3-(3-hydroxy-phenyl)propionate hydroxylase. | 0.897 |
RPB_0904 | RPB_0906 | RPB_0904 | RPB_0906 | Conserved hypothetical protein. | Beta-lactamase-like. | 0.940 |
RPB_0904 | RPB_0908 | RPB_0904 | RPB_0908 | Conserved hypothetical protein. | Maleylacetoacetate isomerase. | 0.725 |
RPB_0904 | RPB_0909 | RPB_0904 | RPB_0909 | Conserved hypothetical protein. | Fumarylacetoacetate hydrolase. | 0.517 |
RPB_0904 | hmgA | RPB_0904 | RPB_0907 | Conserved hypothetical protein. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.756 |
RPB_0906 | RPB_0903 | RPB_0906 | RPB_0903 | Beta-lactamase-like. | 3-(3-hydroxy-phenyl)propionate hydroxylase. | 0.897 |
RPB_0906 | RPB_0904 | RPB_0906 | RPB_0904 | Beta-lactamase-like. | Conserved hypothetical protein. | 0.940 |
RPB_0906 | RPB_0908 | RPB_0906 | RPB_0908 | Beta-lactamase-like. | Maleylacetoacetate isomerase. | 0.811 |
RPB_0906 | RPB_0909 | RPB_0906 | RPB_0909 | Beta-lactamase-like. | Fumarylacetoacetate hydrolase. | 0.606 |
RPB_0906 | hmgA | RPB_0906 | RPB_0907 | Beta-lactamase-like. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.874 |
RPB_0908 | RPB_0099 | RPB_0908 | RPB_0099 | Maleylacetoacetate isomerase. | Pterin-4-alpha-carbinolamine dehydratase. | 0.535 |
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