STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPB_2115Short chain enoyl-CoA hydratase. (281 aa)    
Predicted Functional Partners:
RPB_0821
3-hydroxyacyl-CoA dehydrogenase.
 0.847
RPB_2120
Acyl-CoA dehydrogenase-like.
  
 0.790
RPB_0525
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.767
RPB_2121
Enoyl-CoA hydratase/isomerase.
 
  
 
0.741
RPB_4564
Periplasmic sensor hybrid histidine kinase.
  
 
 0.612
RPB_4224
Hpt sensor hybrid histidine kinase.
  
 
 0.607
RPB_0035
Multi-sensor hybrid histidine kinase.
   
 
 0.603
RPB_0545
Multi-sensor hybrid histidine kinase.
   
 
 0.603
RPB_3965
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.603
RPB_3852
Hpt sensor hybrid histidine kinase.
  
 
 0.595
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.