STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPB_3578Enoyl-CoA hydratase/isomerase. (268 aa)    
Predicted Functional Partners:
RPB_3577
AMP-dependent synthetase and ligase.
 
 
 0.932
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.818
RPB_1001
O-acetylhomoserine/O-acetylserine sulfhydrylase.
   
 
 0.811
RPB_1764
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.810
RPB_1360
O-acetylhomoserine/O-acetylserine sulfhydrylase.
   
 
 0.808
RPB_2667
O-acetylhomoserine/O-acetylserine sulfhydrylase.
   
 
  0.802
RPB_3960
O-acetylhomoserine/O-acetylserine sulfhydrylase.
   
 
  0.802
RPB_0450
Methionine gamma-lyase.
   
 
 0.801
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
   
 
 0.801
RPB_2913
Cystathionine beta-lyase.
   
 
 0.801
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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