STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhL-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (313 aa)    
Predicted Functional Partners:
korB
2-oxoglutarate:ferredoxin oxidoreductase, thiamin-diphosphate-binding subunit.
  
 
 0.995
por
Pyruvate:ferredoxin/flavodoxin oxidoreductase.
  
 
 0.991
korA
2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit.
  
 
 0.988
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.974
vorA
2-oxoacid:ferredoxin oxidoreductase, alpha subunit.
  
 
 0.968
maeB-2
Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing.
  
 0.962
maeB-1
Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing.
  
 0.962
icd
Isocitrate dehydrogenase, NADP-dependent; Belongs to the monomeric-type IDH family.
  
  
 0.960
korD
2-oxoglutarate:ferredoxin oxidoreductase, ferredoxin subunit.
  
  
 0.952
vorB
2-oxoacid:ferredoxin oxidoreductase, thiamin-diphosphate-binding subunit.
  
 
 0.948
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.