Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Geob_3146 | Geob_3147 | Geob_3146 | Geob_3147 | Flavin oxidoreductase, PfaD family, putative. | Polyketide synthase. | 0.999 |
| Geob_3146 | hemA | Geob_3146 | Geob_1300 | Flavin oxidoreductase, PfaD family, putative. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.443 |
| Geob_3146 | hemB | Geob_3146 | Geob_1247 | Flavin oxidoreductase, PfaD family, putative. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.445 |
| Geob_3146 | hemD | Geob_3146 | Geob_1298 | Flavin oxidoreductase, PfaD family, putative. | Uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase. | 0.483 |
| Geob_3146 | hemL | Geob_3146 | Geob_0461 | Flavin oxidoreductase, PfaD family, putative. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.659 |
| Geob_3147 | Geob_3146 | Geob_3147 | Geob_3146 | Polyketide synthase. | Flavin oxidoreductase, PfaD family, putative. | 0.999 |
| Geob_3147 | hemL | Geob_3147 | Geob_0461 | Polyketide synthase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.620 |
| atpB | atpI | Geob_0458 | Geob_0459 | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | ATP synthase-associated magnesium import membrane protein AtpI. | 0.830 |
| atpB | atpZ | Geob_0458 | Geob_0460 | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | ATP synthase-associated magnesium import membrane protein AtpZ. | 0.910 |
| atpB | hemL | Geob_0458 | Geob_0461 | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.586 |
| atpI | atpB | Geob_0459 | Geob_0458 | ATP synthase-associated magnesium import membrane protein AtpI. | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.830 |
| atpI | atpZ | Geob_0459 | Geob_0460 | ATP synthase-associated magnesium import membrane protein AtpI. | ATP synthase-associated magnesium import membrane protein AtpZ. | 0.986 |
| atpI | hemL | Geob_0459 | Geob_0461 | ATP synthase-associated magnesium import membrane protein AtpI. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.586 |
| atpZ | atpB | Geob_0460 | Geob_0458 | ATP synthase-associated magnesium import membrane protein AtpZ. | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.910 |
| atpZ | atpI | Geob_0460 | Geob_0459 | ATP synthase-associated magnesium import membrane protein AtpZ. | ATP synthase-associated magnesium import membrane protein AtpI. | 0.986 |
| atpZ | hemL | Geob_0460 | Geob_0461 | ATP synthase-associated magnesium import membrane protein AtpZ. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.597 |
| cysG | hemA | Geob_1302 | Geob_1300 | Precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase, putative. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.829 |
| cysG | hemB | Geob_1302 | Geob_1247 | Precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase, putative. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.673 |
| cysG | hemC | Geob_1302 | Geob_1299 | Precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase, putative. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.940 |
| cysG | hemD | Geob_1302 | Geob_1298 | Precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase, putative. | Uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase. | 0.999 |
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