node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Geob_1673 | ruvC | Geob_1673 | Geob_2325 | Endonuclease DUF559, putative. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.608 |
Geob_2326 | Geob_3872 | Geob_2326 | Geob_3872 | Protein of unknown function DUF28. | Protein of unknown function DUF2242. | 0.494 |
Geob_2326 | ruvA | Geob_2326 | Geob_2324 | Protein of unknown function DUF28. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.779 |
Geob_2326 | ruvB | Geob_2326 | Geob_2323 | Protein of unknown function DUF28. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.631 |
Geob_2326 | ruvC | Geob_2326 | Geob_2325 | Protein of unknown function DUF28. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.763 |
Geob_2372 | dnaE | Geob_2372 | Geob_3293 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase III, alpha subunit. | 0.685 |
Geob_2372 | polA | Geob_2372 | Geob_1408 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.925 |
Geob_2372 | recX | Geob_2372 | Geob_1117 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.489 |
Geob_2372 | ruvA | Geob_2372 | Geob_2324 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.457 |
Geob_2372 | ruvB | Geob_2372 | Geob_2323 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.512 |
Geob_2372 | ruvC | Geob_2372 | Geob_2325 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.513 |
Geob_3872 | Geob_2326 | Geob_3872 | Geob_2326 | Protein of unknown function DUF2242. | Protein of unknown function DUF28. | 0.494 |
Geob_3872 | ruvA | Geob_3872 | Geob_2324 | Protein of unknown function DUF2242. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.608 |
Geob_3872 | ruvB | Geob_3872 | Geob_2323 | Protein of unknown function DUF2242. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.444 |
Geob_3872 | ruvC | Geob_3872 | Geob_2325 | Protein of unknown function DUF2242. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.608 |
dnaE | Geob_2372 | Geob_3293 | Geob_2372 | DNA polymerase III, alpha subunit. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.685 |
dnaE | polA | Geob_3293 | Geob_1408 | DNA polymerase III, alpha subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.631 |
dnaE | ruvA | Geob_3293 | Geob_2324 | DNA polymerase III, alpha subunit. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.547 |
dnaE | ruvB | Geob_3293 | Geob_2323 | DNA polymerase III, alpha subunit. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.420 |
dnaE | ruvC | Geob_3293 | Geob_2325 | DNA polymerase III, alpha subunit. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.526 |