STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0466KEGG: sco:SCO1748 expression regulator. (474 aa)    
Predicted Functional Partners:
Haur_0067
PFAM: protein of unknown function DUF574; KEGG: rrs:RoseRS_1762 protein of unknown function DUF574.
  
     0.720
Haur_4021
KEGG: sdn:Sden_2265 hypothetical protein.
  
     0.664
Haur_3105
PFAM: peptidase M14 carboxypeptidase A; MAM protein; KEGG: stp:Strop_4082 peptidase M14, carboxypeptidase A.
  
     0.663
Haur_2647
PFAM: Carbohydrate-binding family V/XII; chitin-binding domain 3 protein; KEGG: pap:PSPA7_4667 chitin-binding protein CbpD precursor.
  
     0.638
Haur_3848
NB-ARC domain protein; PFAM: TPR repeat-containing protein; NB-ARC domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: fal:FRAAL2534 putative regulatory protein (AfsR-like protein).
  
     0.601
Haur_4085
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fal:FRAAL5706 putative quinone binding protein; putative glyoxalase domain.
  
     0.520
Haur_2175
Chitinase; PFAM: glycoside hydrolase family 19; Carbohydrate-binding family V/XII; KEGG: stp:Strop_4405 chitinase.
  
     0.509
Haur_0461
PFAM: aminoglycoside phosphotransferase; KEGG: afm:AFUA_3G11050 hypothetical protein.
 
     0.496
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.486
Haur_2679
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rrs:RoseRS_0656 endonuclease/exonuclease/phosphatase.
  
     0.482
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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