STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1417PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2499 protein serine phosphatase with GAF(s) sensor(s). (400 aa)    
Predicted Functional Partners:
Haur_1422
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2161 anti-sigma-factor antagonist.
 
 0.942
Haur_1423
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_1194 anti-sigma-factor antagonist.
  
   0.827
Haur_1416
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: chu:CHU_0702 transcriptional regulatory protein, AraC-type.
       0.773
Haur_1624
KEGG: rrs:RoseRS_3290 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
   0.766
Haur_2188
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: rca:Rcas_1195 anti-sigma-factor antagonist.
 
   0.757
Haur_1623
PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_3289 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
   0.706
Haur_4094
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2161 anti-sigma-factor antagonist.
  
   0.677
Haur_1622
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_4098 anti-sigma-factor antagonist.
  
   0.638
Haur_0630
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: syn:slr0359 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
  
 0.580
Haur_4167
PFAM: cyclic nucleotide-binding; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sfu:Sfum_4027 cyclic nucleotide-binding protein.
 
 
0.545
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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