STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1421Protein serine phosphatase with GAF(s) sensor(s); PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rca:Rcas_1196 protein serine phosphatase with GAF(s) sensor(s). (995 aa)    
Predicted Functional Partners:
Haur_1422
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2161 anti-sigma-factor antagonist.
 
 0.988
Haur_1423
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_1194 anti-sigma-factor antagonist.
 
   0.958
Haur_1624
KEGG: rrs:RoseRS_3290 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
 
 0.790
Haur_4094
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2161 anti-sigma-factor antagonist.
 
   0.774
Haur_1622
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_4098 anti-sigma-factor antagonist.
 
   0.769
Haur_1420
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc02271 ribitol type dehydrogenase protein.
       0.762
Haur_1419
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: tfu:Tfu_1751 putative methyltransferase.
       0.756
Haur_0630
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: syn:slr0359 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 
 0.739
Haur_2188
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: rca:Rcas_1195 anti-sigma-factor antagonist.
 
 
 0.735
Haur_4259
KEGG: rca:Rcas_2148 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
0.709
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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