STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2120PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: msm:MSMEG_1712 ABC transporter periplasmic-binding protein YtfQ. (332 aa)    
Predicted Functional Partners:
Haur_2118
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: aav:Aave_2250 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.991
Haur_2117
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: aav:Aave_2249 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.989
Haur_2119
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbe:Cbei_4461 ABC transporter related.
 0.989
Haur_2121
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2255 periplasmic binding protein/LacI transcriptional regulator.
 
  
 
0.945
Haur_4154
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2255 periplasmic binding protein/LacI transcriptional regulator.
  
  
 
0.905
Haur_0593
PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_1646 response regulator receiver sensor signal transduction histidine kinase.
  
 
 0.896
Haur_4547
KEGG: ppd:Ppro_2908 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
   
 
 0.850
Haur_3521
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bja:blr2985 two-component hybrid sensor and regulator.
   
 
 0.836
Haur_4339
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV2246 putative ABC transporter ATP-binding protein.
 
 0.701
Haur_4708
Histidine kinase; PFAM: ABC transporter related; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: AAA ATPase; KEGG: acr:Acry_1854 ABC transporter related.
 
 
 0.699
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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