STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2314TIGRFAM: polymorphic outer membrane protein; KEGG: rca:Rcas_2988 polymorphic outer membrane protein. (541 aa)    
Predicted Functional Partners:
Haur_2313
Hypothetical protein; KEGG: mxa:MXAN_1668 serine/threonine kinase associate protein KapC.
       0.727
Haur_2515
KEGG: rrs:RoseRS_4272 hypothetical protein.
 
     0.590
Haur_1928
PFAM: FG-GAP repeat protein; SMART: Integrin alpha beta-propellor repeat protein; KEGG: gvi:gll4216 unknown protein.
  
     0.562
Haur_1814
PFAM: FG-GAP repeat protein; KEGG: ava:Ava_0582 integrins alpha chain.
  
     0.541
Haur_2315
KEGG: sfr:Sfri_1617 hypothetical protein.
  
   0.513
Haur_0356
KEGG: rrs:RoseRS_2152 hypothetical protein.
  
     0.473
Haur_2820
PFAM: glycoside hydrolase family 5; cellulose-binding family II; KEGG: tfu:Tfu_2712 similar to endoglucanase.
  
 
   0.443
Haur_1973
PFAM: Tail Collar domain protein; KEGG: ter:Tery_2255 hypothetical protein.
  
     0.436
Haur_3384
KEGG: rrs:RoseRS_3991 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.432
Haur_2968
PFAM: Dynamin family protein; GTP-binding protein HSR1-related; Miro domain protein; KEGG: rca:Rcas_1377 dynamin family protein.
  
     0.429
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.