STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_3768PFAM: Ankyrin; KEGG: tpe:Tpen_1284 ankyrin. (525 aa)    
Predicted Functional Partners:
Haur_1334
Hypothetical protein; KEGG: ngo:NGO0363 putative stress-sensitive restriction system protein.
  
 0.899
Haur_1873
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: ana:alr2679 polyketide synthase.
   
 0.840
Haur_2412
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: mxa:MXAN_4528 polyketide synthase.
   
 0.840
Haur_3961
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: mxa:MXAN_4527 polyketide synthase.
   
 0.840
Haur_3967
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: mxa:MXAN_3620 polyketide synthase type I.
   
 0.840
Haur_4252
PFAM: Cytochrome b/b6 domain; KEGG: sus:Acid_3505 cytochrome b/b6, N-terminal domain.
    
  0.757
Haur_1893
PFAM: nuclear protein SET; KEGG: mmr:Mmar10_0843 nuclear protein SET.
    
 0.655
Haur_2914
PFAM: NHL repeat containing protein; KEGG: mba:Mbar_A0416 hypothetical protein.
 
    0.627
Haur_2008
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: rpc:RPC_3036 amino acid adenylation.
  
 0.620
Haur_0539
KEGG: rfr:Rfer_4406 hypothetical protein.
    
 0.617
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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