node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Haur_2539 | pnp | Haur_2539 | Haur_3880 | PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: cno:NT01CX_1301 helicase, SNF2/RAD54 family, putative. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.911 |
Haur_2539 | rho | Haur_2539 | Haur_3377 | PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: cno:NT01CX_1301 helicase, SNF2/RAD54 family, putative. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.454 |
Haur_2539 | rplB | Haur_2539 | Haur_4918 | PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: cno:NT01CX_1301 helicase, SNF2/RAD54 family, putative. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.520 |
Haur_2539 | rplC | Haur_2539 | Haur_4915 | PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: cno:NT01CX_1301 helicase, SNF2/RAD54 family, putative. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.904 |
Haur_2539 | rplD | Haur_2539 | Haur_4916 | PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: cno:NT01CX_1301 helicase, SNF2/RAD54 family, putative. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.821 |
Haur_2539 | rpoA | Haur_2539 | Haur_4940 | PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: cno:NT01CX_1301 helicase, SNF2/RAD54 family, putative. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
Haur_2539 | rpoB | Haur_2539 | Haur_0244 | PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: cno:NT01CX_1301 helicase, SNF2/RAD54 family, putative. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
Haur_2539 | rpsD | Haur_2539 | Haur_4939 | PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: cno:NT01CX_1301 helicase, SNF2/RAD54 family, putative. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.830 |
Haur_4969 | pnp | Haur_4969 | Haur_3880 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.910 |
Haur_4969 | rho | Haur_4969 | Haur_3377 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.437 |
Haur_4969 | rplB | Haur_4969 | Haur_4918 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.520 |
Haur_4969 | rplC | Haur_4969 | Haur_4915 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.904 |
Haur_4969 | rplD | Haur_4969 | Haur_4916 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.813 |
Haur_4969 | rpoA | Haur_4969 | Haur_4940 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.677 |
Haur_4969 | rpoB | Haur_4969 | Haur_0244 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.691 |
Haur_4969 | rpsD | Haur_4969 | Haur_4939 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sth:STH1647 ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.830 |
nusA | pnp | Haur_0473 | Haur_3880 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.950 |
nusA | rho | Haur_0473 | Haur_3377 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.929 |
nusA | rplB | Haur_0473 | Haur_4918 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.946 |
nusA | rplC | Haur_0473 | Haur_4915 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.953 |