STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_4154PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2255 periplasmic binding protein/LacI transcriptional regulator. (329 aa)    
Predicted Functional Partners:
Haur_2117
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: aav:Aave_2249 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.997
Haur_2118
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: aav:Aave_2250 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.990
Haur_0593
PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_1646 response regulator receiver sensor signal transduction histidine kinase.
  
 
 0.980
Haur_2119
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbe:Cbei_4461 ABC transporter related.
 0.977
Haur_3661
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bld:BLi00444 putative ABC transporter (permease); RBL00402; Belongs to the binding-protein-dependent transport system permease family.
  
 0.956
Haur_2120
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: msm:MSMEG_1712 ABC transporter periplasmic-binding protein YtfQ.
  
  
 
0.905
Haur_2121
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2255 periplasmic binding protein/LacI transcriptional regulator.
  
  
 
0.902
Haur_3933
PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_0230 integral membrane sensor signal transduction histidine kinase.
 
  
   0.896
Haur_0803
KEGG: rca:Rcas_0996 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
    0.892
Haur_4404
PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0204 integral membrane sensor hybrid histidine kinase.
 
  
   0.882
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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