STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_4387PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KR domain protein; KEGG: bov:BOV_A0393 3-hydroxyacyl-CoA dehydrogenase type II; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (255 aa)    
Predicted Functional Partners:
Haur_4386
Hypothetical protein.
       0.596
Haur_2008
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: rpc:RPC_3036 amino acid adenylation.
  
 
 0.564
Haur_0839
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nca:Noca_4295 enoyl-CoA hydratase.
  
  0.561
Haur_0853
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rca:Rcas_0977 enoyl-CoA hydratase/isomerase.
  
  0.561
Haur_1202
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rrs:RoseRS_2302 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.561
Haur_4241
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mag:amb0178 enoyl-CoA hydratase/carnithine racemase.
  
  0.561
Haur_0522
KEGG: rca:Rcas_3206 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  0.542
Haur_3465
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: rrs:RoseRS_3827 propionyl-CoA carboxylase.
 
 
 0.533
Haur_1842
KEGG: mxa:MXAN_2887 hypothetical protein.
   
 
 0.516
Haur_2564
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_C6224 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.502
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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