STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_4853PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rca:Rcas_3169 protein serine/threonine phosphatase. (193 aa)    
Predicted Functional Partners:
Haur_4854
PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_2297 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
   0.967
Haur_4858
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_2460 putative PAS/PAC sensor protein.
 
   0.859
Haur_4422
TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; KEGG: rrs:RoseRS_0409 putative PAS/PAC sensor protein.
 
 
 0.848
Haur_1962
KEGG: rca:Rcas_2373 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.846
Haur_2953
KEGG: rca:Rcas_2373 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.843
Haur_3609
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase HAMP region domain protein; KEGG: rrs:RoseRS_1935 anti-sigma-factor antagonist.
 
   0.843
Haur_2684
PFAM: ATP-binding region ATPase domain protein; KEGG: rca:Rcas_0675 putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
   0.842
Haur_2210
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase HAMP region domain protein; Cache domain protein; KEGG: rca:Rcas_0590 anti-sigma-factor antagonist.
 
   0.839
Haur_1270
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; GAF domain protein; KEGG: rrs:RoseRS_2566 anti-sigma-factor antagonist.
 
   0.838
Haur_2740
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; GAF domain protein; KEGG: rca:Rcas_0550 anti-sigma-factor antagonist.
 
   0.838
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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