STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAK27479.1Glycosyltransferase of family GT51; Cell envelope biogenesis, outer membrane. (699 aa)    
Predicted Functional Partners:
CAK28193.1
Glycosyltransferase of family GT51; Cell envelope biogenesis, outer membrane.
  
 
 
0.927
CAK28169.1
D-alanyl-D-alanine carboxypeptidase; Cell envelope biogenesis, outer membrane.
     
 0.903
CAK27478.1
Uncharacterized conserved membrane protein.
       0.773
ftsI
Possible peptidoglycan synthetase; Cell envelope biogenesis, outer membrane.
  
 
 
 0.748
CAK28098.1
Conserved hypothetical protein.
   
 
 0.694
chlG
Chlorophyll synthase 33 kD subunit; Photosynthesis.
       0.693
CAK27481.1
Conserved hypothetical protein specific to cyanobacteria.
       0.693
rodA
Rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
 
 
 0.675
ftsW
Bacterial cell division membrane protein; Cell division and chromosome partitioning; Belongs to the SEDS family.
  
 
 
 0.660
murC
UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.655
Your Current Organism:
Synechococcus sp. RCC307
NCBI taxonomy Id: 316278
Other names: S. sp. RCC307, Synechococcus sp. MINSyn016-15m-01 substr. AC6A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.