Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAK27489.1 | CAK27490.1 | SynRCC307_0586 | SynRCC307_0587 | Predicted membrane metal-binding protein. | Uncharacterized conserved secreted protein. | 0.412 |
CAK27490.1 | CAK27489.1 | SynRCC307_0587 | SynRCC307_0586 | Uncharacterized conserved secreted protein. | Predicted membrane metal-binding protein. | 0.412 |
CAK27490.1 | CAK27491.1 | SynRCC307_0587 | SynRCC307_0588 | Uncharacterized conserved secreted protein. | Uncharacterized conserved secreted protein. | 0.645 |
CAK27490.1 | CAK27816.1 | SynRCC307_0587 | SynRCC307_0913 | Uncharacterized conserved secreted protein. | Uncharacterized protein wiht hemolysin-type calcium-binding regions; Possible secreted protein, possibly specific to RCC307 (compositional bias, mask the G residues in protein sequence before blast search); Belongs to the peptidase S8 family. | 0.675 |
CAK27490.1 | CAK28825.1 | SynRCC307_0587 | SynRCC307_1922 | Uncharacterized conserved secreted protein. | Gluconolactonase; Carbohydrate transport and metabolism. | 0.407 |
CAK27490.1 | CAK29269.1 | SynRCC307_0587 | SynRCC307_2366 | Uncharacterized conserved secreted protein. | Uncharacterized conserved membrane protein. | 0.642 |
CAK27490.1 | acpP | SynRCC307_0587 | SynRCC307_0132 | Uncharacterized conserved secreted protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.653 |
CAK27490.1 | ctp | SynRCC307_0587 | SynRCC307_0444 | Uncharacterized conserved secreted protein. | Carboxyl-terminal processing protease; Cell envelope biogenesis, outer membrane; Belongs to the peptidase S41A family. | 0.454 |
CAK27490.1 | ctpA | SynRCC307_0587 | SynRCC307_1463 | Uncharacterized conserved secreted protein. | Carboxyl-terminal processing protease; Cell envelope biogenesis, outer membrane; Belongs to the peptidase S41A family. | 0.454 |
CAK27490.1 | lepB | SynRCC307_0587 | SynRCC307_0869 | Uncharacterized conserved secreted protein. | Signal peptidase I; Intracellular trafficking and secretion; Belongs to the peptidase S26 family. | 0.413 |
CAK27491.1 | CAK27490.1 | SynRCC307_0588 | SynRCC307_0587 | Uncharacterized conserved secreted protein. | Uncharacterized conserved secreted protein. | 0.645 |
CAK27816.1 | CAK27490.1 | SynRCC307_0913 | SynRCC307_0587 | Uncharacterized protein wiht hemolysin-type calcium-binding regions; Possible secreted protein, possibly specific to RCC307 (compositional bias, mask the G residues in protein sequence before blast search); Belongs to the peptidase S8 family. | Uncharacterized conserved secreted protein. | 0.675 |
CAK28825.1 | CAK27490.1 | SynRCC307_1922 | SynRCC307_0587 | Gluconolactonase; Carbohydrate transport and metabolism. | Uncharacterized conserved secreted protein. | 0.407 |
CAK29269.1 | CAK27490.1 | SynRCC307_2366 | SynRCC307_0587 | Uncharacterized conserved membrane protein. | Uncharacterized conserved secreted protein. | 0.642 |
acpP | CAK27490.1 | SynRCC307_0132 | SynRCC307_0587 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Uncharacterized conserved secreted protein. | 0.653 |
ctp | CAK27490.1 | SynRCC307_0444 | SynRCC307_0587 | Carboxyl-terminal processing protease; Cell envelope biogenesis, outer membrane; Belongs to the peptidase S41A family. | Uncharacterized conserved secreted protein. | 0.454 |
ctpA | CAK27490.1 | SynRCC307_1463 | SynRCC307_0587 | Carboxyl-terminal processing protease; Cell envelope biogenesis, outer membrane; Belongs to the peptidase S41A family. | Uncharacterized conserved secreted protein. | 0.454 |
lepB | CAK27490.1 | SynRCC307_0869 | SynRCC307_0587 | Signal peptidase I; Intracellular trafficking and secretion; Belongs to the peptidase S26 family. | Uncharacterized conserved secreted protein. | 0.413 |