STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppc,Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (992 aa)    
Predicted Functional Partners:
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
 0.955
pykF
Pyruvate kinase; Carbohydrate transport and metabolism; Belongs to the pyruvate kinase family.
     
 0.938
mqoA
Malate:quinone oxidoreductase; Energy production and conversion.
     
 0.935
gltS-2
Ferredoxin-dependent glutamate synthase; Amino acid transport and metabolism.
  
  
 0.904
gltA
Citrate synthase; Energy production and conversion; Belongs to the citrate synthase family.
     
 0.897
pgk,
Phosphoglycerate kinase; Carbohydrate transport and metabolism; Belongs to the phosphoglycerate kinase family.
  
 
 0.888
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.832
trpE
Anthranilate synthase component I; Amino acid transport and metabolism.
  
  
 0.815
CAK28992.1
Glutamate-cysteine ligase family 2 protein.
       0.811
CAK28994.1
Conserved hypothetical protein.
     
 0.810
Your Current Organism:
Synechococcus sp. RCC307
NCBI taxonomy Id: 316278
Other names: S. sp. RCC307, Synechococcus sp. MINSyn016-15m-01 substr. AC6A1
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